ADaM Basic Data Structure (BDS) example dataset
adlb.Rdadlb is a re-export of the random.cdisc.data::cadlb dataset, included in
{dtlg} for function usage illustration and testing.
Examples
adlb
#> STUDYID USUBJID SUBJID SITEID AGE AGEU SEX
#> <char> <char> <char> <char> <int> <fctr> <fctr>
#> 1: AB12345 AB12345-BRA-1-id-105 id-105 BRA-1 38 YEARS M
#> 2: AB12345 AB12345-BRA-1-id-105 id-105 BRA-1 38 YEARS M
#> 3: AB12345 AB12345-BRA-1-id-105 id-105 BRA-1 38 YEARS M
#> 4: AB12345 AB12345-BRA-1-id-105 id-105 BRA-1 38 YEARS M
#> 5: AB12345 AB12345-BRA-1-id-105 id-105 BRA-1 38 YEARS M
#> ---
#> 8396: AB12345 AB12345-USA-8-id-206 id-206 USA-8 34 YEARS F
#> 8397: AB12345 AB12345-USA-8-id-206 id-206 USA-8 34 YEARS F
#> 8398: AB12345 AB12345-USA-8-id-206 id-206 USA-8 34 YEARS F
#> 8399: AB12345 AB12345-USA-8-id-206 id-206 USA-8 34 YEARS F
#> 8400: AB12345 AB12345-USA-8-id-206 id-206 USA-8 34 YEARS F
#> RACE ETHNIC COUNTRY DTHFL
#> <fctr> <fctr> <fctr> <fctr>
#> 1: BLACK OR AFRICAN AMERICAN HISPANIC OR LATINO BRA N
#> 2: BLACK OR AFRICAN AMERICAN HISPANIC OR LATINO BRA N
#> 3: BLACK OR AFRICAN AMERICAN HISPANIC OR LATINO BRA N
#> 4: BLACK OR AFRICAN AMERICAN HISPANIC OR LATINO BRA N
#> 5: BLACK OR AFRICAN AMERICAN HISPANIC OR LATINO BRA N
#> ---
#> 8396: ASIAN NOT HISPANIC OR LATINO USA N
#> 8397: ASIAN NOT HISPANIC OR LATINO USA N
#> 8398: ASIAN NOT HISPANIC OR LATINO USA N
#> 8399: ASIAN NOT HISPANIC OR LATINO USA N
#> 8400: ASIAN NOT HISPANIC OR LATINO USA N
#> INVID INVNAM ARM ARMCD ACTARM ACTARMCD
#> <char> <char> <fctr> <fctr> <fctr> <fctr>
#> 1: INV ID BRA-1 Dr. BRA-1 Doe A: Drug X ARM A A: Drug X ARM A
#> 2: INV ID BRA-1 Dr. BRA-1 Doe A: Drug X ARM A A: Drug X ARM A
#> 3: INV ID BRA-1 Dr. BRA-1 Doe A: Drug X ARM A A: Drug X ARM A
#> 4: INV ID BRA-1 Dr. BRA-1 Doe A: Drug X ARM A A: Drug X ARM A
#> 5: INV ID BRA-1 Dr. BRA-1 Doe A: Drug X ARM A A: Drug X ARM A
#> ---
#> 8396: INV ID USA-8 Dr. USA-8 Doe C: Combination ARM C C: Combination ARM C
#> 8397: INV ID USA-8 Dr. USA-8 Doe C: Combination ARM C C: Combination ARM C
#> 8398: INV ID USA-8 Dr. USA-8 Doe C: Combination ARM C C: Combination ARM C
#> 8399: INV ID USA-8 Dr. USA-8 Doe C: Combination ARM C C: Combination ARM C
#> 8400: INV ID USA-8 Dr. USA-8 Doe C: Combination ARM C C: Combination ARM C
#> TRT01P TRT01A TRT02P TRT02A REGION1
#> <fctr> <fctr> <fctr> <fctr> <fctr>
#> 1: A: Drug X A: Drug X C: Combination A: Drug X South America
#> 2: A: Drug X A: Drug X C: Combination A: Drug X South America
#> 3: A: Drug X A: Drug X C: Combination A: Drug X South America
#> 4: A: Drug X A: Drug X C: Combination A: Drug X South America
#> 5: A: Drug X A: Drug X C: Combination A: Drug X South America
#> ---
#> 8396: C: Combination C: Combination B: Placebo C: Combination North America
#> 8397: C: Combination C: Combination B: Placebo C: Combination North America
#> 8398: C: Combination C: Combination B: Placebo C: Combination North America
#> 8399: C: Combination C: Combination B: Placebo C: Combination North America
#> 8400: C: Combination C: Combination B: Placebo C: Combination North America
#> STRATA1 STRATA2 BMRKR1 BMRKR2 ITTFL SAFFL BMEASIFL BEP01FL AEWITHFL
#> <fctr> <fctr> <num> <fctr> <fctr> <fctr> <fctr> <fctr> <fctr>
#> 1: B S1 4.156914 MEDIUM Y Y Y Y N
#> 2: B S1 4.156914 MEDIUM Y Y Y Y N
#> 3: B S1 4.156914 MEDIUM Y Y Y Y N
#> 4: B S1 4.156914 MEDIUM Y Y Y Y N
#> 5: B S1 4.156914 MEDIUM Y Y Y Y N
#> ---
#> 8396: B S1 14.478057 HIGH Y Y Y Y N
#> 8397: B S1 14.478057 HIGH Y Y Y Y N
#> 8398: B S1 14.478057 HIGH Y Y Y Y N
#> 8399: B S1 14.478057 HIGH Y Y Y Y N
#> 8400: B S1 14.478057 HIGH Y Y Y Y N
#> RANDDT TRTSDTM TRTEDTM TRT01SDTM
#> <Date> <POSc> <POSc> <POSc>
#> 1: 2020-03-08 2020-03-08 05:39:28 2022-02-14 20:58:26 2020-03-08 05:39:28
#> 2: 2020-03-08 2020-03-08 05:39:28 2022-02-14 20:58:26 2020-03-08 05:39:28
#> 3: 2020-03-08 2020-03-08 05:39:28 2022-02-14 20:58:26 2020-03-08 05:39:28
#> 4: 2020-03-08 2020-03-08 05:39:28 2022-02-14 20:58:26 2020-03-08 05:39:28
#> 5: 2020-03-08 2020-03-08 05:39:28 2022-02-14 20:58:26 2020-03-08 05:39:28
#> ---
#> 8396: 2019-07-19 2019-07-22 10:23:30 2022-07-22 04:23:30 2019-07-22 10:23:30
#> 8397: 2019-07-19 2019-07-22 10:23:30 2022-07-22 04:23:30 2019-07-22 10:23:30
#> 8398: 2019-07-19 2019-07-22 10:23:30 2022-07-22 04:23:30 2019-07-22 10:23:30
#> 8399: 2019-07-19 2019-07-22 10:23:30 2022-07-22 04:23:30 2019-07-22 10:23:30
#> 8400: 2019-07-19 2019-07-22 10:23:30 2022-07-22 04:23:30 2019-07-22 10:23:30
#> TRT01EDTM TRT02SDTM TRT02EDTM
#> <POSc> <POSc> <POSc>
#> 1: 2021-02-14 14:58:26 2021-02-14 14:58:26 2022-02-14 20:58:26
#> 2: 2021-02-14 14:58:26 2021-02-14 14:58:26 2022-02-14 20:58:26
#> 3: 2021-02-14 14:58:26 2021-02-14 14:58:26 2022-02-14 20:58:26
#> 4: 2021-02-14 14:58:26 2021-02-14 14:58:26 2022-02-14 20:58:26
#> 5: 2021-02-14 14:58:26 2021-02-14 14:58:26 2022-02-14 20:58:26
#> ---
#> 8396: 2021-07-21 22:23:30 2021-07-21 22:23:30 2022-07-22 04:23:30
#> 8397: 2021-07-21 22:23:30 2021-07-21 22:23:30 2022-07-22 04:23:30
#> 8398: 2021-07-21 22:23:30 2021-07-21 22:23:30 2022-07-22 04:23:30
#> 8399: 2021-07-21 22:23:30 2021-07-21 22:23:30 2022-07-22 04:23:30
#> 8400: 2021-07-21 22:23:30 2021-07-21 22:23:30 2022-07-22 04:23:30
#> AP01SDTM AP01EDTM AP02SDTM
#> <POSc> <POSc> <POSc>
#> 1: 2020-03-08 05:39:28 2021-02-14 14:58:26 2021-02-14 14:58:26
#> 2: 2020-03-08 05:39:28 2021-02-14 14:58:26 2021-02-14 14:58:26
#> 3: 2020-03-08 05:39:28 2021-02-14 14:58:26 2021-02-14 14:58:26
#> 4: 2020-03-08 05:39:28 2021-02-14 14:58:26 2021-02-14 14:58:26
#> 5: 2020-03-08 05:39:28 2021-02-14 14:58:26 2021-02-14 14:58:26
#> ---
#> 8396: 2019-07-22 10:23:30 2021-07-21 22:23:30 2021-07-21 22:23:30
#> 8397: 2019-07-22 10:23:30 2021-07-21 22:23:30 2021-07-21 22:23:30
#> 8398: 2019-07-22 10:23:30 2021-07-21 22:23:30 2021-07-21 22:23:30
#> 8399: 2019-07-22 10:23:30 2021-07-21 22:23:30 2021-07-21 22:23:30
#> 8400: 2019-07-22 10:23:30 2021-07-21 22:23:30 2021-07-21 22:23:30
#> AP02EDTM EOSSTT EOTSTT EOSDT EOSDY
#> <POSc> <fctr> <fctr> <Date> <int>
#> 1: 2022-02-14 20:58:26 DISCONTINUED DISCONTINUED 2022-02-14 709
#> 2: 2022-02-14 20:58:26 DISCONTINUED DISCONTINUED 2022-02-14 709
#> 3: 2022-02-14 20:58:26 DISCONTINUED DISCONTINUED 2022-02-14 709
#> 4: 2022-02-14 20:58:26 DISCONTINUED DISCONTINUED 2022-02-14 709
#> 5: 2022-02-14 20:58:26 DISCONTINUED DISCONTINUED 2022-02-14 709
#> ---
#> 8396: 2022-07-22 04:23:30 COMPLETED COMPLETED 2022-07-22 1096
#> 8397: 2022-07-22 04:23:30 COMPLETED COMPLETED 2022-07-22 1096
#> 8398: 2022-07-22 04:23:30 COMPLETED COMPLETED 2022-07-22 1096
#> 8399: 2022-07-22 04:23:30 COMPLETED COMPLETED 2022-07-22 1096
#> 8400: 2022-07-22 04:23:30 COMPLETED COMPLETED 2022-07-22 1096
#> DCSREAS DTHDT DTHCAUS DTHCAT LDDTHELD LDDTHGR1 LSTALVDT
#> <fctr> <Date> <fctr> <fctr> <int> <fctr> <Date>
#> 1: PROTOCOL VIOLATION <NA> <NA> <NA> NA <NA> 2022-03-09
#> 2: PROTOCOL VIOLATION <NA> <NA> <NA> NA <NA> 2022-03-09
#> 3: PROTOCOL VIOLATION <NA> <NA> <NA> NA <NA> 2022-03-09
#> 4: PROTOCOL VIOLATION <NA> <NA> <NA> NA <NA> 2022-03-09
#> 5: PROTOCOL VIOLATION <NA> <NA> <NA> NA <NA> 2022-03-09
#> ---
#> 8396: <NA> <NA> <NA> <NA> NA <NA> 2022-08-07
#> 8397: <NA> <NA> <NA> <NA> NA <NA> 2022-08-07
#> 8398: <NA> <NA> <NA> <NA> NA <NA> 2022-08-07
#> 8399: <NA> <NA> <NA> <NA> NA <NA> 2022-08-07
#> 8400: <NA> <NA> <NA> <NA> NA <NA> 2022-08-07
#> DTHADY ADTHAUT ASEQ LBSEQ LBTESTCD LBTEST
#> <int> <fctr> <int> <int> <fctr> <fctr>
#> 1: NA <NA> 1 1 ALT Alanine Aminotransferase Measurement
#> 2: NA <NA> 4 4 ALT Alanine Aminotransferase Measurement
#> 3: NA <NA> 7 7 ALT Alanine Aminotransferase Measurement
#> 4: NA <NA> 10 10 ALT Alanine Aminotransferase Measurement
#> 5: NA <NA> 13 13 ALT Alanine Aminotransferase Measurement
#> ---
#> 8396: NA <NA> 9 9 IGA Immunoglobulin A Measurement
#> 8397: NA <NA> 12 12 IGA Immunoglobulin A Measurement
#> 8398: NA <NA> 15 15 IGA Immunoglobulin A Measurement
#> 8399: NA <NA> 18 18 IGA Immunoglobulin A Measurement
#> 8400: NA <NA> 21 21 IGA Immunoglobulin A Measurement
#> LBCAT LBSTRESC ASPID PARAM PARAMCD
#> <fctr> <char> <int> <fctr> <fctr>
#> 1: CHEMISTRY <7 6364 Alanine Aminotransferase Measurement ALT
#> 2: CHEMISTRY <7 1658 Alanine Aminotransferase Measurement ALT
#> 3: CHEMISTRY <7 7407 Alanine Aminotransferase Measurement ALT
#> 4: CHEMISTRY <7 7315 Alanine Aminotransferase Measurement ALT
#> 5: CHEMISTRY <7 1986 Alanine Aminotransferase Measurement ALT
#> ---
#> 8396: IMMUNOLOGY >3 2272 Immunoglobulin A Measurement IGA
#> 8397: IMMUNOLOGY >3 7143 Immunoglobulin A Measurement IGA
#> 8398: IMMUNOLOGY >3 4733 Immunoglobulin A Measurement IGA
#> 8399: IMMUNOLOGY >3 2104 Immunoglobulin A Measurement IGA
#> 8400: IMMUNOLOGY >3 6942 Immunoglobulin A Measurement IGA
#> AVAL AVALU BASE2 BASE BASETYPE ABLFL2 ABLFL CHG2
#> <num> <fctr> <num> <num> <fctr> <fctr> <fctr> <num>
#> 1: 4.297921 U/L 4.297921 NA LAST Y 0.000000000
#> 2: 24.695882 U/L 4.297921 24.695882 LAST Y 20.397960615
#> 3: 24.872255 U/L 4.297921 24.695882 LAST 20.574333510
#> 4: 3.666809 U/L 4.297921 24.695882 LAST -0.631111790
#> 5: 18.548449 U/L 4.297921 24.695882 LAST 14.250527824
#> ---
#> 8396: 2.758459 g/L 2.955814 3.076949 LAST -0.197354442
#> 8397: 2.739585 g/L 2.955814 3.076949 LAST -0.216228534
#> 8398: 2.946323 g/L 2.955814 3.076949 LAST -0.009491096
#> 8399: 2.966002 g/L 2.955814 3.076949 LAST 0.010187788
#> 8400: 2.710396 g/L 2.955814 3.076949 LAST -0.245418028
#> PCHG2 CHG PCHG DTYPE ANRIND BNRIND SHIFT1
#> <num> <num> <num> <lgcl> <fctr> <fctr> <fctr>
#> 1: 0.0000000 NA NA NA LOW NORMAL
#> 2: 474.6006162 0.0000000 0.0000000 NA NORMAL NORMAL
#> 3: 478.7042953 0.1763729 0.7141794 NA NORMAL NORMAL NORMAL to NORMAL
#> 4: -14.6841172 -21.0290724 -85.1521421 NA LOW NORMAL NORMAL to LOW
#> 5: 331.5679157 -6.1474328 -24.8925421 NA NORMAL NORMAL NORMAL to NORMAL
#> ---
#> 8396: -6.6768223 -0.3184894 -10.3508191 NA NORMAL HIGH HIGH to NORMAL
#> 8397: -7.3153635 -0.3373635 -10.9642219 NA NORMAL HIGH HIGH to NORMAL
#> 8398: -0.3210992 -0.1306261 -4.2453116 NA NORMAL HIGH HIGH to NORMAL
#> 8399: 0.3446695 -0.1109472 -3.6057532 NA NORMAL HIGH HIGH to NORMAL
#> 8400: -8.3028917 -0.3665530 -11.9128725 NA NORMAL HIGH HIGH to NORMAL
#> ATOXGR BTOXGR ADTM ADY ATPTN AVISIT AVISITN
#> <fctr> <fctr> <POSc> <int> <int> <fctr> <int>
#> 1: -4 0 2020-05-27 05:39:28 80 1 SCREENING -1
#> 2: 0 0 2020-08-04 05:39:28 149 1 BASELINE 0
#> 3: 0 0 2021-01-16 05:39:28 314 1 WEEK 1 DAY 8 1
#> 4: -3 0 2021-04-10 05:39:28 398 1 WEEK 2 DAY 15 2
#> 5: 0 0 2021-06-21 05:39:28 470 1 WEEK 3 DAY 22 3
#> ---
#> 8396: 0 3 2020-01-30 10:23:30 192 1 WEEK 1 DAY 8 1
#> 8397: 0 3 2020-02-26 10:23:30 219 1 WEEK 2 DAY 15 2
#> 8398: 0 3 2020-09-24 10:23:30 430 1 WEEK 3 DAY 22 3
#> 8399: 0 3 2021-07-29 10:23:30 738 1 WEEK 4 DAY 29 4
#> 8400: 0 3 2021-10-29 10:23:30 830 1 WEEK 5 DAY 36 5
#> LOQFL ONTRTFL WORS01FL WGRHIFL WGRLOFL WGRHIVFL WGRLOVFL ANL01FL ANRLO
#> <fctr> <fctr> <fctr> <fctr> <fctr> <fctr> <fctr> <fctr> <num>
#> 1: Y 7.0
#> 2: N Y 7.0
#> 3: N Y Y Y Y Y Y 7.0
#> 4: Y Y Y Y Y Y Y 7.0
#> 5: N Y Y Y Y Y 7.0
#> ---
#> 8396: N Y Y Y Y Y Y Y 0.8
#> 8397: N Y Y Y Y Y 0.8
#> 8398: N Y Y Y Y Y 0.8
#> 8399: N Y Y Y Y Y 0.8
#> 8400: N Y Y Y Y Y 0.8
#> ANRHI BTOXGRL BTOXGRH ATOXGRL ATOXGRH ATOXDSCL
#> <num> <fctr> <fctr> <fctr> <fctr> <char>
#> 1: 55 0 0 4 <Missing> <NA>
#> 2: 55 0 0 0 0 <NA>
#> 3: 55 0 0 0 0 <NA>
#> 4: 55 0 0 3 <Missing> <NA>
#> 5: 55 0 0 0 0 <NA>
#> ---
#> 8396: 3 <Missing> 3 0 0 <NA>
#> 8397: 3 <Missing> 3 0 0 <NA>
#> 8398: 3 <Missing> 3 0 0 <NA>
#> 8399: 3 <Missing> 3 0 0 <NA>
#> 8400: 3 <Missing> 3 0 0 <NA>
#> ATOXDSCH
#> <char>
#> 1: Alanine aminotransferase increased
#> 2: Alanine aminotransferase increased
#> 3: Alanine aminotransferase increased
#> 4: Alanine aminotransferase increased
#> 5: Alanine aminotransferase increased
#> ---
#> 8396: Immunoglobulin A increased
#> 8397: Immunoglobulin A increased
#> 8398: Immunoglobulin A increased
#> 8399: Immunoglobulin A increased
#> 8400: Immunoglobulin A increased